Commit 7c4ac06e authored by Annett Erkes's avatar Annett Erkes
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...@@ -54,9 +54,10 @@ die in die Forschung der Arbeitsgruppen (HiWi, Abschlussarbeiten, Forschungsproj ...@@ -54,9 +54,10 @@ die in die Forschung der Arbeitsgruppen (HiWi, Abschlussarbeiten, Forschungsproj
5. **Silvio Weging**, Bioinformatik 5. **Silvio Weging**, Bioinformatik
**kASA: Taxonomic Analysis of Metagenomic Data on a Notebook** **kASA: Taxonomic Analysis of Metagenomic Data on a Notebook**
The taxonomic analysis of metagenomic sequencing data has become important in many areas of life sciences. However, currently available software tools for that purpose either consume large amounts of RAM or yield an insufficient quality of the results. To identify and profile metagenomic sequences with high computational efficiency and a small user-definable memory footprint, we developed a k-mer based software named "kASA". The taxonomic analysis of metagenomic sequencing data has become important in many areas of life sciences. However, currently available software tools for that purpose either consume large amounts of RAM or yield an insufficient quality of the results. To identify and profile metagenomic sequences with high computational efficiency and a small user-definable memory footprint, we developed a k-mer based software named "kASA".
6. **Name**, Arbeitsgruppe 6. **Annett Erkes**, Bioinformatik
**Vortragstitel** **Bioinformatic analysis of TAL effectors in the Xanthomonas oryzae - rice interaction**
Inhaltliche Kurzbeschreibung in 2-3 Sätzen, wenn möglich in Englisch. Diseases caused by plant-pathogenic Xanthomonas bacteria are a serious threat for many important crop plants including rice. Efficiently protecting plants from these pathogens requires a deeper understanding of infection strategies. Such infection strategies depend on a special class of effector
proteins, termed transcription activator-like effectors (TALEs). Our approach PrediTALE predicts plant target genes of TALEs.
7. **Name**, Arbeitsgruppe 7. **Name**, Arbeitsgruppe
**Vortragstitel** **Vortragstitel**
Inhaltliche Kurzbeschreibung in 2-3 Sätzen, wenn möglich in Englisch. Inhaltliche Kurzbeschreibung in 2-3 Sätzen, wenn möglich in Englisch.
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